Uses of Class
uk.ac.cisban.rod.database.cv.BackgroundMutationCV

Packages that use BackgroundMutationCV

uk.ac.cisban.rod.dao	Database access package containing all code for database access.
uk.ac.cisban.rod.data	Manages all data incoming from the database and forwards database requests from the GUI.
uk.ac.cisban.rod.data.handlers	Handles all of the connections with the DAO and keeps track of the progress of the task.
uk.ac.cisban.rod.database.plates	Stores everything to do with plates, including barcodes, positions, etc.

Uses of BackgroundMutationCV in uk.ac.cisban.rod.dao

Methods in uk.ac.cisban.rod.dao that return BackgroundMutationCV

BackgroundMutationCV	Find.findBackgroundMutationCV(javax.jdo.PersistenceManager pm, java.lang.String mutationName) Finds a background mutation CV given its name.
BackgroundMutationCV	Persist.newBackgroundMutationCV(java.lang.String name, java.lang.String description) Persists a new BackgroundMutationCV.

Methods in uk.ac.cisban.rod.dao that return types with arguments of type BackgroundMutationCV

java.util.Collection<BackgroundMutationCV>

DAO.getBackgroundMutationCVs() Returns the whole list of BackgroundMutationCVs in the database.

Methods in uk.ac.cisban.rod.dao with parameters of type BackgroundMutationCV

java.util.Map<java.lang.String,java.lang.Exception>

DAO.makeMasterplateSet(java.util.List<java.lang.String> barcodes, java.util.Map<java.lang.Integer,java.util.Set<MasterplatePosition>> mp, java.lang.String description, MasterplateLibraryCV mpcv, BackgroundMutationCV bmcv, PlateCV pcv) Creates a new MasterplateSet based on the given parameters.

Uses of BackgroundMutationCV in uk.ac.cisban.rod.data

Methods in uk.ac.cisban.rod.data that return types with arguments of type BackgroundMutationCV

java.util.Collection<BackgroundMutationCV>

PlateManager.getBackgroundMutationCVs() creates a link to the database and retrieves all backgroundMutationCVs.

Methods in uk.ac.cisban.rod.data with parameters of type BackgroundMutationCV

java.util.Map<java.lang.String,java.lang.Exception>	PlateManager.createMasterplateSet(java.util.List<java.lang.String> barcodes, java.util.Map<java.lang.Integer,java.util.Set<MasterplatePosition>> numToPos, java.lang.String description, MasterplateLibraryCV mpcv, BackgroundMutationCV bmcv, DatabaseProgressListener listener, PlateCV pcv)
javax.swing.SwingWorker	PlateManager.loadMasterPlate(MasterplateLibraryCV mpcv, java.lang.String description, java.util.List<java.lang.String> barcodes, java.io.File file, BackgroundMutationCV bmcv, PlateCV pcv) Returns a thread that will load a new masterplate.
javax.swing.SwingWorker	PlateManager.newMutation(BackgroundMutationCV mutationCV) Returns a thread that will create a new mutation.

Uses of BackgroundMutationCV in uk.ac.cisban.rod.data.handlers

Constructors in uk.ac.cisban.rod.data.handlers with parameters of type BackgroundMutationCV

AddMutationTask(BackgroundMutationCV treatment)

MasterplateSetHandler(MasterplateLibraryCV mpcv, java.lang.String description, java.util.List<java.lang.String> barcodes, java.io.File file, BackgroundMutationCV bmcv, PlateCV pcv)

Uses of BackgroundMutationCV in uk.ac.cisban.rod.database.plates

Methods in uk.ac.cisban.rod.database.plates that return BackgroundMutationCV

BackgroundMutationCV

MasterplateSet.getBackgroundMutationCV()

Constructors in uk.ac.cisban.rod.database.plates with parameters of type BackgroundMutationCV

MasterplateSet(java.util.Date datePlated, java.lang.String description, MasterplateLibraryCV masterplateLibraryCV, java.util.Set<Masterplate> masterplates, BackgroundMutationCV backgroundMutationCV)