Uses of Package
uk.ac.cisban.rod.database.data

Packages that use uk.ac.cisban.rod.database.data

uk.ac.cisban.rod.dao	Database access package containing all code for database access.
uk.ac.cisban.rod.dao.specifics	Grouping specific sets of tasks together in communication to the database.
uk.ac.cisban.rod.data	Manages all data incoming from the database and forwards database requests from the GUI.
uk.ac.cisban.rod.data.handlers	Handles all of the connections with the DAO and keeps track of the progress of the task.
uk.ac.cisban.rod.database.data	Storing experimental data classes.
uk.ac.cisban.rod.database.fuge	Protocol and Action classes inspired by the FuGE API.
uk.ac.cisban.rod.database.plates	Stores everything to do with plates, including barcodes, positions, etc.
uk.ac.cisban.rod.gui.functions.fill	Retrieve commonly-requested lists from the database and populate JComboBoxes.
uk.ac.cisban.rod.parsing.logfiles	Parsers for log files.

Classes in uk.ac.cisban.rod.database.data used by uk.ac.cisban.rod.dao

Experiment
Consists of repeats, a description and a protocol.

Image
Represents a photograph taken of a particular plate at a particular time that has been processed by image analysis.

ImageResult
Results of image analysis: the area of the spot, with feature and value to be added as they develop.

ImageSpot
A logging event that represents the position on a plate that has been photographed.

ImageTransformation
Conversion of one image to another via a transformation as defined in a CV of transformation types.

Inoculation
Represents an inoculation from a master plate to a working plate.

LogEvent
To be extended to represent a logging event of any kind with a source plate position and a destination plate position.

PlateTreatment
Represents the addition of a TreatmentCV to a plate at a particular date-time.

Repeat
An experimental repeat that has an applied protocol and data.

Spotting
Represents a spotting from a master plate to a working plate.

Classes in uk.ac.cisban.rod.database.data used by uk.ac.cisban.rod.dao.specifics

Image
Represents a photograph taken of a particular plate at a particular time that has been processed by image analysis.

ImageSpot
A logging event that represents the position on a plate that has been photographed.

Inoculation
Represents an inoculation from a master plate to a working plate.

LogEvent
To be extended to represent a logging event of any kind with a source plate position and a destination plate position.

Repeat
An experimental repeat that has an applied protocol and data.

Spotting
Represents a spotting from a master plate to a working plate.

Classes in uk.ac.cisban.rod.database.data used by uk.ac.cisban.rod.data

Experiment
Consists of repeats, a description and a protocol.

Image
Represents a photograph taken of a particular plate at a particular time that has been processed by image analysis.

Repeat
An experimental repeat that has an applied protocol and data.

Classes in uk.ac.cisban.rod.database.data used by uk.ac.cisban.rod.data.handlers

Experiment
Consists of repeats, a description and a protocol.

Image
Represents a photograph taken of a particular plate at a particular time that has been processed by image analysis.

Classes in uk.ac.cisban.rod.database.data used by uk.ac.cisban.rod.database.data

Experiment
Consists of repeats, a description and a protocol.

Image
Represents a photograph taken of a particular plate at a particular time that has been processed by image analysis.

ImageResult
Results of image analysis: the area of the spot, with feature and value to be added as they develop.

ImageSpot
A logging event that represents the position on a plate that has been photographed.

LogEvent
To be extended to represent a logging event of any kind with a source plate position and a destination plate position.

PlateTreatment
Represents the addition of a TreatmentCV to a plate at a particular date-time.

Repeat
An experimental repeat that has an applied protocol and data.

Spotting
Represents a spotting from a master plate to a working plate.

Classes in uk.ac.cisban.rod.database.data used by uk.ac.cisban.rod.database.fuge

LogEvent
To be extended to represent a logging event of any kind with a source plate position and a destination plate position.

Classes in uk.ac.cisban.rod.database.data used by uk.ac.cisban.rod.database.plates

PlateTreatment
Represents the addition of a TreatmentCV to a plate at a particular date-time.

Classes in uk.ac.cisban.rod.database.data used by uk.ac.cisban.rod.gui.functions.fill

Experiment
Consists of repeats, a description and a protocol.

Classes in uk.ac.cisban.rod.database.data used by uk.ac.cisban.rod.parsing.logfiles

LogEvent
To be extended to represent a logging event of any kind with a source plate position and a destination plate position.