Uses of Class
uk.ac.cisban.rod.database.fuge.ProtocolCV

Packages that use ProtocolCV

uk.ac.cisban.rod.dao	Database access package containing all code for database access.
uk.ac.cisban.rod.data	Manages all data incoming from the database and forwards database requests from the GUI.
uk.ac.cisban.rod.database.data	Storing experimental data classes.
uk.ac.cisban.rod.database.fuge	Protocol and Action classes inspired by the FuGE API.

Uses of ProtocolCV in uk.ac.cisban.rod.dao

Methods in uk.ac.cisban.rod.dao that return ProtocolCV

ProtocolCV	Find.findProtocolCV(javax.jdo.PersistenceManager pm, java.lang.Long id) Finds a ProtocolCV given its database id .
ProtocolCV	Find.findProtocolCV(javax.jdo.PersistenceManager pm, java.lang.String identifier) Finds a ProtocolCV given its database id.
ProtocolCV	Persist.newProtocolCV(java.lang.String identifier, java.lang.String name, java.util.Collection<java.lang.String> equipmentIds, boolean isShown)

Methods in uk.ac.cisban.rod.dao that return types with arguments of type ProtocolCV

java.util.Collection<ProtocolCV>

DAO.getProtocols() Returns the whole list of ProtocolCVs in the database.

Methods in uk.ac.cisban.rod.dao with parameters of type ProtocolCV

void	DAO.iterateProtocol(ProtocolCV protocol) Iterates through a ProtocolCV and its ActionCVs recursively.

Uses of ProtocolCV in uk.ac.cisban.rod.data

Methods in uk.ac.cisban.rod.data that return types with arguments of type ProtocolCV

java.util.Collection<ProtocolCV>

ExperimentManager.getProtocols() Retrieves all protocols from the database.

Uses of ProtocolCV in uk.ac.cisban.rod.database.data

Methods in uk.ac.cisban.rod.database.data that return ProtocolCV

ProtocolCV

Experiment.getProtocol()

Methods in uk.ac.cisban.rod.database.data with parameters of type ProtocolCV

void	Experiment.setProtocol(ProtocolCV protocol)

Constructors in uk.ac.cisban.rod.database.data with parameters of type ProtocolCV

Experiment(java.lang.String experimentName, java.lang.String description, ProtocolCV protocol, boolean complete, MasterplateSet masterplateSet)

Experiment(java.lang.String experimentName, java.lang.String description, ProtocolCV protocol, boolean complete, MasterplateSet masterplateSet, java.util.Set<Repeat> repeats)

Uses of ProtocolCV in uk.ac.cisban.rod.database.fuge

Methods in uk.ac.cisban.rod.database.fuge that return ProtocolCV

ProtocolCV	ProtocolApplication.getProtocolRef()
ProtocolCV	ActionCV.getSubProtocolRef()

Methods in uk.ac.cisban.rod.database.fuge with parameters of type ProtocolCV

void	ProtocolApplication.setProtocolRef(ProtocolCV protocolRef)
void	ActionCV.setSubProtocolRef(ProtocolCV subProtocolRef)

Constructors in uk.ac.cisban.rod.database.fuge with parameters of type ProtocolCV

ActionCV(java.lang.Integer actionOrdinal, java.lang.String actionText, java.lang.String identifier, java.lang.String name, boolean iterable, ProtocolCV subProtocolRef)

ProtocolApplication(ProtocolCV protocolRef)